AT4G15810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 159 (TAIR:AT4G02510.1); Has 2093 Blast hits to 1898 proteins in 523 species: Archae - 13; Bacteria - 941; Metazoa - 425; Fungi - 113; Plants - 353; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:8989162..8992591 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99692.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.12 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||
| Length | 918 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESEKPGIVS ILAAATVDSE KPRVSISAVR AIAAARADSF LLTPSSEASS YSNGLDFETD EDETVLEDVV LDGVRVDRLL GEELGGDGSE FQVGVGFIDH 101: LQSEVSGDER GSMKAKVVIP RAVLSLDDDE FDEILGSDVD SEEVRMNYSD KLDDGLMSFG NIEESSLGVP PEGSSDFMAE NEGNSSEASI ELGQNFKQLI 201: EKGDSKSTIN KEDSGGSIHE FDALMKPSDV ERVEDSAVEL AKMGMNDKPE YAGSNIGELV SIEEVMVQEK SSDNVLVSFE SSLGVMTGEC KEFLVESEGN 301: AVDEDKGLDE TVSSLVEQGV GQASTSKESN NRTDVGSVCD ADELIIPRDE SIGSESRDSG DKDAGNMIGK AEEHCENDRG AVSELEKLEC ADEPEIGMSS 401: ESFQLTPTSD SEMIMNLEVA GGIDVVVIGC GSSDQKAEEE SENEGNQESD DTDRKLSLPD EDRASSLISS FETANETVED GNQLISRTMP ENSSVIAYDI 501: MENETMARLI HNHTFMELDE YEGTGDTSEK LTGSSFQNSS ELLSSNHSVE LISERVKERV EKTQLLKEKL QRIIRRTCLS RENSTVTKVA SKMSLAGGEH 601: PTSLGLDHMF DGTKIVLPEQ EFPADLDFSI NVLVIGKTGV GKSATVNSIF GETKSAVGAF GVTTNSANYV VGNVGGIQIS ILDTPGLLSS ATEEQFNQEV 701: LIARCLGIVL AENNMSFFSA NKSSESTCSD WRLNLLILCC SVKIRSKAGS LQKQNTDVEK AGVFGSQLSS FTLFCSLWNV LLNSGHTSHS HDDLEEKKRK 801: LLDSYPEIIW DEQSQECLEQ ETLLVENQES EDVERQHEKG TVLGRVRTRR GRLGFQATKR FGIYLDTSDV HAGFSIGSRD CRRNVQEEGK ILVRMRGSMS 901: VLGLVPMLIS VFTSGKDI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)