AT4G15260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.713 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B5 (TAIR:AT4G15280.1); Has 7322 Blast hits to 7283 proteins in 449 species: Archae - 0; Bacteria - 472; Metazoa - 1888; Fungi - 30; Plants - 4859; Viruses - 20; Other Eukaryotes - 53 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8714065..8715144 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40626.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.57 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFCSSMIDIA NEFGVPCYMI YTSNATFLGI TLHVQEMYDD KKYDVSDLDE SVNELEFPCL TRPYPVKCLP HILSSKDWLP FFAAQGRSFR KMKGILVNTV 101: AELEPHALKM FNNVDLPQAY PVGPVLHLDN GDDDDEKRLE VLRWLDDQPP KSVLFLCFGS MGGFTEEQTR EVAVALNRSG HRFLWSLRRA SPNIMMERPG 201: DYKNLEEVLP DGFLERTLDR GKVIGWAPQV AVLEKPAIGG FVTHCGWNSM LESLWFGVPM VTWPLYAEQK VNAFEMVEEL GLAVEIRKCI SGDLLLIGEM 301: EIVTAEDIER AIRCVMEQDS DVRSRVKEMA EKCHVALMDG GSSKTALQKF IQDVIENVA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)