AT2G30140.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.555 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G30150.1); Has 7945 Blast hits to 7893 proteins in 488 species: Archae - 0; Bacteria - 512; Metazoa - 2235; Fungi - 27; Plants - 5022; Viruses - 79; Other Eukaryotes - 70 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:12872200..12873691 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51731.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.67 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||
| Length | 455 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDPNESPPNQ FRHVVAMPYP GRGHINPMMN LCKRLVRRYP NLHVTFVVTE EWLGFIGPDP KPDRIHFSTL PNLIPSELVR AKDFIGFIDA VYTRLEEPFE 101: KLLDSLNSPP PSVIFADTYV IWAVRVGRKR NIPVVSLWTM SATILSFFLH SDLLISHGHA LFEPSEEEVV DYVPGLSPTK LRDLPPIFDG YSDRVFKTAK 201: LCFDELPGAR SLLFTTAYEL EHKAIDAFTS KLDIPVYAIG PLIPFEELSV QNDNKEPNYI QWLEEQPEGS VLYISQGSFL SVSEAQMEEI VKGLRESGVR 301: FLWVARGGEL KLKEALEGSL GVVVSWCDQL RVLCHKAVGG FWTHCGFNST LEGIYSGVPM LAFPLFWDQI LNAKMIVEDW RVGMRIERTK KNELLIGREE 401: IKEVVKRFMD RESEEGKEMR RRACDLSEIS RGAVAKSGSS NVNIDEFVRH ITNTN |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)