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AT4G13290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.858
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily A, polypeptide 19
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily A, polypeptide 19 (CYP71A19); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 20 (TAIR:AT4G13310.1); Has 32995 Blast hits to 32800 proteins in 1663 species: Archae - 48; Bacteria - 3584; Metazoa - 11750; Fungi - 6960; Plants - 9514; Viruses - 3; Other Eukaryotes - 1136 (source: NCBI BLink).
Protein Annotations
EC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AL049608
EMBL:AL161536EMBL:AY133692EMBL:CP002687EnsemblPlants:AT4G13290
EnsemblPlants:AT4G13290.1entrez:826959Gene3D:1.10.630.10GeneID:826959
Genevisible:Q9T0K0GO:GO:0005506GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT4G13290.1
gramene_pathway:4.99.1.6gramene_pathway:CAMALEXIN-SYNgramene_pathway:PWY-581gramene_plant_reactome:1119486
gramene_plant_reactome:6873515hmmpanther:PTHR24298hmmpanther:PTHR24298:SF182HOGENOM:HOG000218629
InParanoid:Q9T0K0InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT4G13290KO:K00517OMA:ICANRPKPaxDb:Q9T0K0
Pfam:PF00067Pfam:Q9T0K0PhylomeDB:Q9T0K0PIR:T06286
PRIDE:Q9T0K0PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9T0K0
PROSITE:PS00086ProteinModelPortal:Q9T0K0Proteomes:UP000006548RefSeq:NP_193065.1
scanprosite:PS00086SMR:Q9T0K0STRING:3702.AT4G13290.1SUPFAM:SSF48264
TAIR:AT4G13290tair10-symbols:CYP71A19TMHMM:TMhelixUniGene:At.33393
UniProt:Q9T0K0
Coordinates (TAIR10) chr4:+:7740681..7742670
Molecular Weight (calculated) 55618.00 Da
IEP (calculated) 9.10
GRAVY (calculated) -0.11
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIILVTLCL TTLLALLLLK SILKRTTTNN LNLPPSPWRL PVIGNLHQLS LNTHRSLRSL SLRYGPLMLL HFGRTPVLIV SSADVAHDIL KTYDVICANR
101: PKTKVIDKIL RGGRDVAFAP YGEYWKQMKS ICIQNLLSNK MVRSYKKIRE DEIKLMIEKV ENASSCSPPS PVNLSQLFMT LTNDIICRAA LGRKYSSKED
201: GIDVENIVRA FSALVGEFPI GEYIPSLSWI DKIRGQDHKM EEVDKRFDEF LERVVKEHED ANKDTRSDLV DTLLTIQSDK SALKLIIWDM FLAGTATSLS
301: FLEWAMTELM RNPKVMKKLQ EEIRSSSRQG LFVTEKEAEK MDYLQAVIKE ALRLRPPAPL MVPRVFSEDV TLKGYNIPAG TQVIINAWAI QRDTTTWGID
401: AEEFRPERHL DSILDFQGQD FKFIPFGSGK RICPGIGFTS ALIGVTLANI VKRFNWRMDV EPQRVQHDLT EATGLVVFRK FPLIAIPSSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)