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AT3G55005.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : tonneau 1b (TON1b)
Curator
Summary (TAIR10)
Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1B appears to be redundant with TON1A. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1B associates with plant centrin CEN1.
Computational
Description (TAIR10)
tonneau 1b (TON1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: plasma membrane, microsome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau family protein (TAIR:AT3G55000.1); Has 213 Blast hits to 211 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKR6eggNOG:ENOG410Y1GNEMBL:AF280058EMBL:AF280059
EMBL:AL049655EMBL:AY075696EMBL:CP002686EnsemblPlants:AT3G55005
EnsemblPlants:AT3G55005.1entrez:824666GeneID:824666Genevisible:Q9FQ24
GO:GO:0000226GO:GO:0000913GO:GO:0005737GO:GO:0005886
GO:GO:0030865GO:GO:0030981Gramene:AT3G55005.1hmmpanther:PTHR15431
HOGENOM:HOG000243934InParanoid:Q9FQ24InterPro:IPR006594iPTMnet:Q9FQ24
KEGG:ath:AT3G55005OMA:AKDSWKSPaxDb:Q9FQ24Pfam:PF16045
Pfam:Q9FQ24Pfscan:PS50896PhylomeDB:Q9FQ24PIR:T06720
PRIDE:Q9FQ24PRO:PR:Q9FQ24PROSITE:PS50896ProteinModelPortal:Q9FQ24
Proteomes:UP000006548RefSeq:NP_567013.1SMR:Q9FQ24STRING:3702.AT3G55005.1
TAIR:AT3G55005tair10-symbols:TON1BUniGene:At.21059UniProt:Q9FQ24
Coordinates (TAIR10) chr3:+:20384131..20386193
Molecular Weight (calculated) 29186.80 Da
IEP (calculated) 4.78
GRAVY (calculated) -0.89
Length 257 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDYTREMMD LKTLVTRTLE KKGVLAKIRA ELRASVFEAI EEEDRVIENN EGLPPALLGS CNDRARQLHA SPSGRLLSAL ICEYLDWAQL NHTLKVYQPE
101: CNSAKDSWKS EIRDFSINNG YELNRNEDSR PLLLDVLEGF LKFENMTQVM GGSSRRESET ESSLSLDTRN PPRRSSASDS LPHQRRSVSA SQASGAATSG
201: YRKDESNWRY DTEDMPEEVM RASTALENLQ LDRKTRNLTS SWRNVKDGTS EEEEGKD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)