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AT3G54690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.543
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Sugar isomerase (SIS) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G54690-MONOMEREC:5.3.1.13eggNOG:COG0517eggNOG:COG0794
eggNOG:ENOG410IFJQEMBL:AK227009EMBL:AL138650EMBL:CP002686
EnsemblPlants:AT3G54690EnsemblPlants:AT3G54690.1entrez:824634GeneID:824634
Genevisible:Q9M1T1GO:GO:0005524GO:GO:0009103GO:GO:0019146
GO:GO:0030246Gramene:AT3G54690.1hmmpanther:PTHR11911hmmpanther:PTHR11911:SF62
HOGENOM:HOG000264729InParanoid:Q9M1T1InterPro:IPR000644InterPro:IPR001347
InterPro:IPR004800KEGG:ath:AT3G54690KO:K06041OMA:ADFAKFH
PaxDb:Q9M1T1Pfam:PF00571Pfam:PF01380Pfam:Q9M1T1
Pfscan:PS51371Pfscan:PS51464PhylomeDB:Q9M1T1PIR:T47628
PIRSF:PIRSF004692PRIDE:Q9M1T1PRO:PR:Q9M1T1PROSITE:PS51371
PROSITE:PS51464ProteinModelPortal:Q9M1T1Proteomes:UP000006548RefSeq:NP_191029.1
SMART:SM00116SMR:Q9M1T1STRING:3702.AT3G54690.1SUPFAM:SSF53697
TAIR:AT3G54690TIGRfam:TIGR00393TIGRFAMs:TIGR00393UniGene:At.1210
UniProt:Q9M1T1
Coordinates (TAIR10) chr3:+:20246586..20247810
Molecular Weight (calculated) 37750.90 Da
IEP (calculated) 7.04
GRAVY (calculated) 0.11
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSLPPPSLD FSSIDHNSLK NGGSSHQEIS HDNLLNLFKS QQDLLNHFFK HLDLSQTLDF SRILLSTTGT VFFTGVGKSA FVANKVSQTL VSLSFRSSFL
101: SPLDALHGDI GALSPRDVLV FFSKSGATEE LLRLVPCARA KGAFLVSLTS VSGNPLAGVC DMNVHLPLQR ELCPFNLAPV TSTAIQMVFG DTIAVALMAA
201: RNLSKEEYAA NHPAGRIGKS LIFKVKDVMK KQEELPVCKE GDLIMDQLVE LTSKGCGCLL VVDEHSRLIG TFTDGDLRRT LKASGEAIFK LSVGEMCNRK
301: PRTIGPETMA VEAMKKMESP PSPVQFLPVV NEDNTLIGIV TLHGLVSAGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)