AT3G53740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ribosomal protein L36e family protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT2G37600.2); Has 732 Blast hits to 731 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 135; Plants - 140; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19913921..19914813 | ||||||||
| Molecular Weight (calculated) | 11680.70 Da | ||||||||
| IEP (calculated) | 12.31 | ||||||||
| GRAVY (calculated) | -0.93 | ||||||||
| Length | 103 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MTTPQVKTGL FVGLNKGHVV TRRELAPRPR SRKGKTSKRT IFIRNLIKEV AGQAPYEKRI TELLKVAKRK LGTHKRAKRK REEMSSVLRK MRSGGGGATE 101: KKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)