AT3G50550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 75703 Blast hits to 19796 proteins in 1115 species: Archae - 327; Bacteria - 34383; Metazoa - 14453; Fungi - 7466; Plants - 2586; Viruses - 958; Other Eukaryotes - 15530 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:18759486..18760095 | ||||||||||||||||||||
| Molecular Weight (calculated) | 10896.70 Da | ||||||||||||||||||||
| IEP (calculated) | 3.12 | ||||||||||||||||||||
| GRAVY (calculated) | -2.11 | ||||||||||||||||||||
| Length | 95 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
1: MADEKEIVDI YSSDEEYDED DDDDDDTDGE SSDEDDEEED RNLSGDDSES SEDDYTDSNS DSDDDDEEDD DDEEEEEEED SLVDKVTRLL KGKQD | ||||||||||||||||||||
| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)