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AT3G21950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.911
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38020.1); Has 907 Blast hits to 896 proteins in 115 species: Archae - 0; Bacteria - 51; Metazoa - 11; Fungi - 3; Plants - 730; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G21950-MONOMEReggNOG:ENOG410IIJ3eggNOG:ENOG410Y96GEMBL:AB028622
EMBL:CP002686EnsemblPlants:AT3G21950EnsemblPlants:AT3G21950.1entrez:821753
Gene3D:3.40.50.150GeneID:821753GO:GO:0008168GO:GO:0046686
Gramene:AT3G21950.1hmmpanther:PTHR31009hmmpanther:PTHR31009:SF19HOGENOM:HOG000238197
InterPro:IPR005299InterPro:IPR029063KEGG:ath:AT3G21950OMA:IITTYQQ
Pfam:PF03492PhylomeDB:Q9LRL5Proteomes:UP000006548RefSeq:NP_188833.4
SMR:Q9LRL5STRING:3702.AT3G21950.1SUPFAM:SSF53335TAIR:AT3G21950
UniGene:At.53427UniProt:Q9LRL5
Coordinates (TAIR10) chr3:+:7734396..7736201
Molecular Weight (calculated) 42013.00 Da
IEP (calculated) 5.32
GRAVY (calculated) -0.39
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVVSMKGGD GEHSYANNSE AQKSITSDAK PEVMKSVNEM IVKMDFPGCI KVADLGCSSG ENTFLVMSEI VNTIITTYQQ NGQNLPEIDC CLNDLPENDF
101: NTTFKLIPSF HEKLKMNVKG NCYVSGCPGS FYTRLFPSKS LHFVHSSFCL HWLSKVPDGL EENKKNVYLR SPCPPNLYES YWNQFKKDFS MFLRMRAEET
201: MPSGRMALTL VGRKTLDPLS KECFKDWSLV SDSLLDLVSE GVVKESDLES FNLPYYSPDE SEVKEVIENE GSFEIKNFET IFGLLFSYKT GHSEVKDDDD
301: DVDHSRRFEV VKTRANMTRS IIEPMLVAHF GEAIIDRLFD KYIYHACQRY DTLRNKPTVN FFVSLTRK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)