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AT3G20940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.902
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 30
Curator
Summary (TAIR10)
a member of A-type cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 705, subfamily A, polypeptide 30 (CYP705A30); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 32 (TAIR:AT3G20950.1); Has 33333 Blast hits to 33151 proteins in 1652 species: Archae - 50; Bacteria - 3607; Metazoa - 11622; Fungi - 7384; Plants - 9408; Viruses - 6; Other Eukaryotes - 1256 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20940-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AK228331
EMBL:AP001304EMBL:CP002686EnsemblPlants:AT3G20940EnsemblPlants:AT3G20940.1
entrez:821644Gene3D:1.10.630.10GeneID:821644GO:GO:0005506
GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037
GO:GO:0044550Gramene:AT3G20940.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF59
HOGENOM:HOG000218628InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT3G20940OMA:IFVETEVPfam:PF00067PhylomeDB:Q9LIG9
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548
RefSeq:NP_188730.2scanprosite:PS00086SMR:Q9LIG9STRING:3702.AT3G20940.1
SUPFAM:SSF48264TAIR:AT3G20940tair10-symbols:CYP705A30TMHMM:TMhelix
UniGene:At.38153UniProt:Q9LIG9
Coordinates (TAIR10) chr3:+:7339732..7341518
Molecular Weight (calculated) 59573.40 Da
IEP (calculated) 7.86
GRAVY (calculated) -0.15
Length 523 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMITFDFQ NSFIFILFFL FSLLCYSLFF RKPKGSRAGR DLPPSPPSFP VIGHLHLLLS ALVHKSFQNI SSKYGPLLHL RVFHIPIVLA SSASVAYEIF
101: KAQDVNVSSR GHAPVGESLW FGSSSFFFAP YGDYFKFMRK LIATKLLGPQ ALERSRKIRA DELDRFYKTL LDKAMKKESV EIGEEAAKLN NNIICKMIMG
201: RSCSEENGEA EKFRHLVIES MALTKQIFFG MIFHKPLKKL GISLFQKDIL SLSRKFDELL EKILFEHEEK KAEHNQANDM MDFLLEAYGD ENAEYKITRN
301: HIKSLFVDLV IAGTDTSVQA TQWTMGELIN NPKILQRLRE EIESVVGNTR LIQENDLPNL PYLQAVVKEG LRLHPPGSIS VRMFQERCEL KGFYIPEKTL
401: LVVNTYAIMR DPNFWEDPEE FKPERFIASS RSEQEDEVRE EVLKYIPFSA GRRGCPGSNL AYISLGIVIG VMVQCFDWRI EGEKVNMNEA AETTALSMAQ
501: PLKCTPVSRT KNPLPSSLHI PSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)