AT3G09780.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : CRINKLY4 related 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:3000838..3003165 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 84189.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.97 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 775 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: METRCSLLFL SLILLYLPKP GSGFGSSGPI AASFGGSAFF CAIDASGRQD VICWGKNYSS PSSPSSSSSS SSIASSTSAS YNIPSMAVLS GGDGFLCGIL 101: SNTSQAFCFS SLGSSSGMDL VPLAYRTTAY SQIAAGNSHV CAVRGAYYSD HDSGTIDCWE ITRATNNNSL IAKENPNFYD QIVSNLVFNN IVSGDGFSCG 201: GIRDGGMLCF GPNSSNLGFN TTSDNFQVLA AGKNSVCAIL NLSREVKCWG EDESFVNSPM NDSRFVSLTA GPRHFCGIRE DNHEVECWGN SNFSLIPKGS 301: GFKAIASSDF IVCGIREEDL VLDCWMVNGS STLAYDPPLE LCSPGMCRAG PCNEKEFAFN ASILNEPDLT SLCVRKELMV CSPCGSDCSH GFFLSSSCTA 401: NSDRICTPCS LCQNSSCSDI CKLHNSNFPD KHWHQLQRLV LIIGSCASAL LIIIIGCCVV PRIVTSPNKE DGAANQFKSC IGKPDLDTDQ PLENVSPAPS 501: VTPFAQVFRL SELKDATNGF KEFNELGRGS YGFVYKAVLA DGRQVAVKRA NAATIIHTNT REFETELEIL CNIRHCNIVN LLGYSTEMGE RLLVYEYMPH 601: GTLHDHLHSG FSPLSWSLRI KIAMQTAKGL EYLHNEAEPR IIHGDVKSSN VLLDSEWVAR VADFGLVTSS NEKNLDIKRD VYDFGVVLLE ILTGRKRYDR 701: DCDPPEIVEW TVPVIREGKA AAIVDTYIAL PRNVEPLLKL ADVAELCVRE DPNQQPTMSE LANWLEHVAR DALIF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)