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AT3G09290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : telomerase activator1
Curator
Summary (TAIR10)
encodes activation factor TAC1 which mediates telomerase activity
Computational
Description (TAIR10)
telomerase activator1 (TAC1); FUNCTIONS IN: transcription activator activity, zinc ion binding, sequence-specific DNA binding transcription factor activity, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G53820.1); Has 684 Blast hits to 684 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 636; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J8P8eggNOG:ENOG4111ECKEMBL:AB493607EMBL:AC011436
EMBL:CP002686EnsemblPlants:AT3G09290EnsemblPlants:AT3G09290.1entrez:820085
GeneID:820085Genevisible:Q9SR34GO:GO:0003677GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0046872
GO:GO:0051973Gramene:AT3G09290.1hmmpanther:PTHR26374hmmpanther:PTHR26374:SF192
HOGENOM:HOG000242276InParanoid:Q9SR34InterPro:IPR007087KEGG:ath:AT3G09290
OMA:WVQESKLPaxDb:Q9SR34Pfam:Q9SR34Pfscan:PS50157
PhylomeDB:Q9SR34PRIDE:Q9SR34PRO:PR:Q9SR34PROSITE:PS00028
PROSITE:PS50157ProteinModelPortal:Q9SR34Proteomes:UP000006548RefSeq:NP_187540.1
scanprosite:PS00028SMR:Q9SR34STRING:3702.AT3G09290.1SUPFAM:SSF57667
TAIR:AT3G09290tair10-symbols:TAC1UniGene:At.53228UniProt:Q9SR34
Coordinates (TAIR10) chr3:+:2856141..2856659
Molecular Weight (calculated) 19332.10 Da
IEP (calculated) 4.81
GRAVY (calculated) -0.96
Length 172 amino acids
Sequence (TAIR10)
(BLAST)
001: MENIKNPKNA DDCSDSISKN SHQGVDDSLN QSRSYVCSFC IRGFSNAQAL GGHMNIHRRD RAKLRQKLME DNKDDVVAES DASEVVSLDL NEQQQQQGEA
101: LTCDDHDQYV DNDISPKQKL EFWVQESKLD TNDHGKVTEA SIDGSSSSHH RDIEVLDLEL RLGQSVVKKK TT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)