AT3G09290.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : telomerase activator1 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes activation factor TAC1 which mediates telomerase activity | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
telomerase activator1 (TAC1); FUNCTIONS IN: transcription activator activity, zinc ion binding, sequence-specific DNA binding transcription factor activity, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G53820.1); Has 684 Blast hits to 684 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 636; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:2856141..2856659 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 19332.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.81 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.96 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 172 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MENIKNPKNA DDCSDSISKN SHQGVDDSLN QSRSYVCSFC IRGFSNAQAL GGHMNIHRRD RAKLRQKLME DNKDDVVAES DASEVVSLDL NEQQQQQGEA 101: LTCDDHDQYV DNDISPKQKL EFWVQESKLD TNDHGKVTEA SIDGSSSSHH RDIEVLDLEL RLGQSVVKKK TT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)