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AT2G46930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:22363647 (2012): extracellular region apoplast
  • PMID:21433285 (2011): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pectinacetylesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 557 Blast hits to 549 proteins in 96 species: Archae - 0; Bacteria - 48; Metazoa - 118; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:ENOG410XQKDeggNOG:KOG4287EMBL:AC004411
EMBL:AY052671EMBL:CP002685EnsemblPlants:AT2G46930EnsemblPlants:AT2G46930.1
entrez:819307ESTHER:arath-o80731GeneID:819307Genevisible:O80731
GO:GO:0005576GO:GO:0005618GO:GO:0052793GO:GO:0071555
Gramene:AT2G46930.1hmmpanther:PTHR21562hmmpanther:PTHR21562:SF12HOGENOM:HOG000238558
InterPro:IPR004963iPTMnet:O80731KEGG:ath:AT2G46930OMA:NTRRSCI
PANTHER:PTHR21562PaxDb:O80731Pfam:O80731Pfam:PF03283
PhylomeDB:O80731PIR:T02194PRIDE:O80731PRO:PR:O80731
ProteinModelPortal:O80731Proteomes:UP000006548RefSeq:NP_182216.1SMR:O80731
STRING:3702.AT2G46930.1TAIR:AT2G46930TMHMM:TMhelixUniGene:At.22242
UniProt:O80731
Coordinates (TAIR10) chr2:+:19283625..19286090
Molecular Weight (calculated) 45946.60 Da
IEP (calculated) 7.29
GRAVY (calculated) -0.17
Length 416 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSVLRIAAA IFWLWLFIVL GVIGSGNVRD TDDEISLLES QLVVTSPSQL LMVPLTLIQA AASKGAVCLD GTLPGYHLHP GSGSGANRWL IQLEGGGWCN
101: TRRSCIFRKT TRRGSSNHME KVLAFTGILS NKSNENPDFF NWNRVKLRYC DGASFTGDSQ DESSQLYYRG QRIWHSAMEE LLSKGMQKAE QALLSGCSAG
201: GLASILHCDQ FKELFPGTTT VKCLSDAGMF MDAVDVSGGH SLRKMFQGVV TVQNLQKELS TACTKHLDPT SCFFPQNLVS GIKTPMFLLN AAYDAWQVQE
301: SLAPPSVDLS GSWKACKSDH SHCNSSQIQF FQDFRTHMVD AVKSFATSTH NGVFINSCFA HCQSERQDTW YAPDSPTLHG KTVAESVGDW YFDRTTVKAI
401: DCPYPCDKTC HNLIFK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)