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AT2G40950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein
Curator
Summary (TAIR10)
bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.
Computational
Description (TAIR10)
BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIGCeggNOG:ENOG410XUDSEMBL:AC002409EMBL:AY136295
EMBL:BT000408EMBL:CP002685EnsemblPlants:AT2G40950EnsemblPlants:AT2G40950.1
entrez:818694GeneID:818694Genevisible:O22208GO:GO:0000139
GO:GO:0003700GO:GO:0005634GO:GO:0005783GO:GO:0005789
GO:GO:0006351GO:GO:0006355GO:GO:0016021GO:GO:0042538
GO:GO:0043565GO:GO:0045893Gramene:AT2G40950.1hmmpanther:PTHR22952
hmmpanther:PTHR22952:SF139HOGENOM:HOG000241437InterPro:IPR004827iPTMnet:O22208
KEGG:ath:AT2G40950ncoils:CoilOMA:AHNSSEIPaxDb:O22208
Pfam:O22208Pfam:PF00170Pfscan:PS50217PhylomeDB:O22208
PIR:T00759PRIDE:O22208PRO:PR:O22208PROSITE:PS50217
ProteinModelPortal:O22208Proteomes:UP000006548RefSeq:NP_565946.1SMART:SM00338
SMR:O22208STRING:3702.AT2G40950.1SUPFAM:SSF57959TAIR:AT2G40950
tair10-symbols:BZIP17TMHMM:TMhelixUniGene:At.42892UniProt:O22208
Coordinates (TAIR10) chr2:-:17087823..17090326
Molecular Weight (calculated) 78442.20 Da
IEP (calculated) 6.27
GRAVY (calculated) -0.63
Length 721 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEPITKEQP PPPAPDPNST YPPPSDFDSI SIPPLDDHFS DQTPIGELMS DLGFPDGEFE LTFDGMDDLY FPAENESFLI PINTSNQEQF GDFTPESESS
101: GISGDCIVPK DADKTITTSG CINRESPRDS DDRCSGADHN LDLPTPLSSQ GSGNCGSDVS EATNESSPKS RNVAVDQKVK VEEAATTTTS ITKRKKEIDE
201: DLTDESRNSK YRRSGEDADA SAVTGEEDEK KRARLMRNRE SAQLSRQRKK HYVEELEEKV RNMHSTITDL NGKISYFMAE NATLRQQLGG NGMCPPHLPP
301: PPMGMYPPMA PMPYPWMPCP PYMVKQQGSQ VPLIPIPRLK PQNTLGTSKA KKSESKKSEA KTKKVASISF LGLLFCLFLF GALAPIVNVN YGGISGAFYG
401: NYRSNYITDQ IYSQHRDRVL DTSRSGAGTG VSNSNGMHRG RDSDRGARKN ISATESSVTP GNGSEPLVAS LFVPRNDKLV KIDGNLIINS ILASEKAVAS
501: RKASESKERK ADLMISKDYT PALPLPDVGR TEELAKHLYR SKAEKQKALS SGSADTLKDQ VKTKAANGEM QQWFREGVAG PMFSSGMCTE VFQFDVSSTS
601: GAIIPAATNV SAEHGKNTTD THKQQNRRIL RGLPIPLPGS DFNLTKEHQR NSSSKEIKPA SSMVVSVLVD PREGGDGDID GMIGGPKSLS RVFVVVLLDS
701: AKYVTYSCVL PRSGAPHLVT T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)