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AT2G35660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FAD/NAD(P)-binding oxidoreductase family protein
Curator
Summary (TAIR10)
Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.
Computational
Description (TAIR10)
CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 9259 Blast hits to 9227 proteins in 1442 species: Archae - 27; Bacteria - 5652; Metazoa - 91; Fungi - 1745; Plants - 591; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G35660-MONOMERBioCyc:ARA:GQT-2778-MONOMERBioCyc:ARA:GQT-2779-MONOMEReggNOG:COG0654
eggNOG:KOG2614EMBL:AC006068EMBL:CP002685EnsemblPlants:AT2G35660
EnsemblPlants:AT2G35660.1entrez:818135ExpressionAtlas:Q9ZQN9Gene3D:3.50.50.60
GeneID:818135GO:GO:0004497GO:GO:0044550GO:GO:0071949
Gramene:AT2G35660.1hmmpanther:PTHR13789hmmpanther:PTHR13789:SF224InterPro:IPR002938
InterPro:IPR023753OMA:QGMKMRSPfam:PF01494PhylomeDB:Q9ZQN9
PIR:D84771Proteomes:UP000006548RefSeq:NP_565814.1SMR:Q9ZQN9
STRING:3702.AT2G35660.1SUPFAM:SSF51905TAIR:AT2G35660tair10-symbols:CTF2A
UniGene:At.13448UniGene:At.68691UniProt:Q9ZQN9
Coordinates (TAIR10) chr2:+:14988499..14990320
Molecular Weight (calculated) 48317.70 Da
IEP (calculated) 9.19
GRAVY (calculated) -0.09
Length 439 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVLLPMYPL QSLARSKRLF PIRTRSKPVC LALTNAQTNG GDQEEKVVIV GAGIGGLATA VSLHRLGIRS VVLEQAESLR TGGTSLTLFK NGWRVLDAIS
101: VGPQLRTQFL EIEGMVVKKE DGRELRSFKF KDDDQSQEVR AVERRVLLET LASQLPPQTI RFSSKLESIQ SNANGDTLLQ LGDGTRLLAQ IVIGCDGIRS
201: KVATWMGFSE PKYVGHCAYR GLGFYPNGQP FQKKVNYIYG KGIRAGYVPV STTKVYWFIC FNSPSLGPKI TDPAILKKQA KELVSTWPED LQNLIDLTPD
301: ETISRTPLVD RWLWPGIAPP ASKGRVVLVG DAWHPMTPNL GQGACCALED SVVLANKLAN AINGGTESIE VAMESYGSER WSRAFPLTVR ANLVGALLQW
401: ENPLVCSIRN NIVIPKLLRL GPMLEHTNFE CEPLFVSKS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)