suba logo
AT2G31990.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
golgi 0.388
plasma membrane 0.307
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Exostosin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:ENOG410XTFHeggNOG:KOG1021EMBL:AC006223
EMBL:BT015812EMBL:BT021113EMBL:CP002685EMBL:KJ138883
EnsemblPlants:AT2G31990EnsemblPlants:AT2G31990.1entrez:817758GeneID:817758
GO:GO:0005794GO:GO:0016021GO:GO:0016757Gramene:AT2G31990.1
hmmpanther:PTHR11062hmmpanther:PTHR11062:SF110InterPro:IPR004263KEGG:ath:AT2G31990
OMA:CKSITRPPaxDb:Q5XF04Pfam:PF03016PIR:F84727
ProteinModelPortal:Q5XF04Proteomes:UP000006548RefSeq:NP_180759.2STRING:3702.AT2G31990.1
TAIR:AT2G31990TMHMM:TMhelixUniGene:At.38132UniProt:Q5XF04
Coordinates (TAIR10) chr2:-:13611500..13613551
Molecular Weight (calculated) 54790.90 Da
IEP (calculated) 10.14
GRAVY (calculated) -0.45
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MKNNNSSSVS IENHPWKKKP TTLLLFLSLL SISLLLLRLS QDKIILITTT KTTATTGTDH QRSHKSSEDD TCLGRYIYIH NLPSRFNLEI IKDCKSITRP
101: KDKISMCKYL DNSGFGPLIG GKSSDYSPSW YATNQFMLEV IFHEKMKSYE CLTRNSSLAS AIYVPYYAGL DFRRHLRRRN VAARDAAGKE LVKWLKKQPQ
201: WKDMSGKNHF LVTGRISRDF RRNSGSRSAW GTNFMLLSES LNLTFLSIER SLTSHNEFAI PYPTYFHPTS TPEILQWQEK IRLTNRTVLF SFAGAQRPSR
301: NQNGVVRTEV IKQCKSSSKT CRFLDCDVNA NSCDDPISLM KLFESSTFCL QPPGDSLTRK SVFDSILAGC IPVFFNQGSA YKQYLWHIPK NSSKYSVYIT
401: VKELRTGGKN KIEEILRGIP NERVVGMREN VIRLIPKIVY AKPNRNKPDG EILEDSFDVA VKGVLERIEG IRRNEFKTD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)