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AT2G31810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27177187 (2016): nucleus
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24124904 (2013): plastid
  • PMID:22550958 (2012): plastid
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ACT domain-containing small subunit of acetolactate synthase protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ACT domain-containing small subunit of acetolactate synthase protein; FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: VALINE-TOLERANT 1 (TAIR:AT5G16290.2); Has 12099 Blast hits to 6187 proteins in 1994 species: Archae - 228; Bacteria - 7466; Metazoa - 4; Fungi - 262; Plants - 115; Viruses - 0; Other Eukaryotes - 4024 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G31810-MONOMERBioGrid:3085eggNOG:COG0440eggNOG:KOG2663
EMBL:AC006533EMBL:AK318696EMBL:AY058881EMBL:AY103307
EMBL:CP002685EnsemblPlants:AT2G31810EnsemblPlants:AT2G31810.1entrez:817738
GeneID:817738Genevisible:Q93YZ7GO:GO:0003984GO:GO:0009097
GO:GO:0009099GO:GO:0009507GO:GO:0016597gramene_plant_reactome:1119460
gramene_plant_reactome:1119600gramene_plant_reactome:6873698gramene_plant_reactome:6874293hmmpanther:PTHR30239
hmmpanther:PTHR30239:SF3HOGENOM:HOG000265291InParanoid:Q93YZ7InterPro:IPR002912
InterPro:IPR004789InterPro:IPR019455KEGG:00290+2.2.1.6KEGG:00650+2.2.1.6
KEGG:00660+2.2.1.6KEGG:00770+2.2.1.6KEGG:ath:AT2G31810KO:K01653
OMA:RCLRSACPaxDb:Q93YZ7Pfam:PF01842Pfam:PF10369
Pfam:PF13710Pfam:Q93YZ7Pfscan:PS51671PhylomeDB:Q93YZ7
PIR:D84725PRIDE:Q93YZ7PRO:PR:Q93YZ7PROSITE:PS51671
ProteinModelPortal:Q93YZ7Proteomes:UP000006548RefSeq:NP_850172.1RefSeq:NP_850173.2
RefSeq:NP_850174.1SMR:Q93YZ7STRING:3702.AT2G31810.1SUPFAM:SSF55021
TAIR:AT2G31810TIGRfam:TIGR00119TIGRFAMs:TIGR00119UniGene:At.24583
UniPathway:UPA00047UniPathway:UPA00049UniProt:Q93YZ7
Coordinates (TAIR10) chr2:+:13524271..13528246
Molecular Weight (calculated) 53876.10 Da
IEP (calculated) 9.41
GRAVY (calculated) -0.05
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAISVSSSP SIRCLRSACS DSSPALVSST RVSFPAKISY LSGISSHRGD EMGKRMEGFV RSVDGKISDA SFSEASSATP KSKVRKHTIS VFVGDESGMI
101: NRIAGVFARR GYNIESLAVG LNRDKALFTI VVCGTERVLQ QVIEQLQKLV NVLKVEDISS EPQVERELML VKVNAHPESR AEIMWLVDTF RARVVDIAEH
201: ALTIEVTGDP GKMIAVERNL KKFQIREIVR TGKIALRREK MGATAPFWRF SAASYPDLKE QAPVSVLRSS KKGAIVPQKE TSAGGDVYPV EPFFDPKVHR
301: ILDAHWGLLT DEDTSGLRSH TLSLLVNDIP GVLNIVTGVF ARRGYNIQSL AVGHAETKGI SRITTVIPAT DESVSKLVQQ LYKLVDVHEV HDLTHLPFSE
401: RELMLIKIAV NAAARRDVLD IASIFRAKAV DVSDHTITLQ LTGDLDKMVA LQRLLEPYGI CEVARTGRVA LARESGVDSK YLRGYSFPLT G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)