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AT2G30230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.982
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZSXeggNOG:ENOG410YSF4EMBL:AC002338EMBL:AC004165
EMBL:AY735593EMBL:CP002685EnsemblPlants:AT2G30230EnsemblPlants:AT2G30230.1
entrez:817573GeneID:817573Gramene:AT2G30230.1hmmpanther:PTHR33052
hmmpanther:PTHR33052:SF26HOGENOM:HOG000237531InterPro:IPR025322KEGG:ath:AT2G30230
OMA:CLTLCEKPfam:PF14009PhylomeDB:O22919PIR:T00577
Proteomes:UP000006548RefSeq:NP_180582.1TAIR:AT2G30230UniGene:At.50978
UniProt:O22919
Coordinates (TAIR10) chr2:+:12897156..12897689
Molecular Weight (calculated) 19843.10 Da
IEP (calculated) 8.77
GRAVY (calculated) -0.53
Length 177 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)