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AT2G26530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1645)
Curator
Summary (TAIR10)
unknown function
Computational
Description (TAIR10)
AR781; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G15760.1); Has 167 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXFAeggNOG:ENOG41113F7EMBL:AC002505EMBL:AY150396
EMBL:CP002685EnsemblPlants:AT2G26530EnsemblPlants:AT2G26530.1entrez:817194
ExpressionAtlas:O48720GeneID:817194GO:GO:0005886Gramene:AT2G26530.1
hmmpanther:PTHR33095hmmpanther:PTHR33095:SF7InterPro:IPR012442OMA:SAYPWEE
Pfam:PF07816PhylomeDB:O48720PIR:T00986Proteomes:UP000006548
RefSeq:NP_180221.1STRING:3702.AT2G26530.1TAIR:AT2G26530tair10-symbols:AR781
UniGene:At.343UniProt:O48720
Coordinates (TAIR10) chr2:-:11283036..11283989
Molecular Weight (calculated) 36206.40 Da
IEP (calculated) 10.21
GRAVY (calculated) -0.97
Length 317 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVMSLTAPS SPRQLSGCFL SAPTSPRRFN EFYREFEEAA TRNFSDRLTV PFDWEETPGT PRKITNDDDD DIDFAFEIGG KLETTSLFAE ELFDGGKIKP
101: LKPPPYLQLD HHHQPQILSP RSPRSPIAHG KNIIRKAFSP RKKPDNVDPF EVAMDKARNG LGEERGRGRR QNSGRRVARS LSPFRVSAYP WEEQEQEQEQ
201: EQRDVQEQRK GTLSSIPSTS SSACVSCKSS SSKKWRLKDF LLFRSASEGR ARHNKDSVKT FTSLFRKQED TKNSSSRGRG SSSVSAHEFH YMSKKAETKD
301: LKKKTFLPYM QIGRFAF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)