AT2G19470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.969 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : casein kinase I-like 5 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
casein kinase I-like 5 (ckl5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 70101 Blast hits to 69707 proteins in 2404 species: Archae - 48; Bacteria - 11303; Metazoa - 26265; Fungi - 7230; Plants - 12439; Viruses - 411; Other Eukaryotes - 12405 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8433851..8436295 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48923.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.54 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 433 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPRVGNKFR LGRKIGSGSF GEIYLGTDVQ TNEEVAIKLE SVKTAHPQLS YESRIYRVLQ GGTGIPNMKW YGVEGDYNVL VMDLLGPSLE DLFSYCKRQF 101: SLKTVLMLAD QMINRLEFIH SKSYLHRDIK PDNFLMGLGR RANQVYIIDY GLAKKYRDSS THRHIPYREN KSLIGTPRYA SLNTHLGIEQ SRRDDIESLG 201: YILMYFLKGS LPWQGLKAGN KKQKYDKISE KKVSTSIETL CRGHPTEFAS YFHYCRSLRF DDKPDYAYLK RLFRNLFIRE GFQFDFVFDW TVYKYQQSQS 301: GNPQPRPHDG GVGTSSGLNP AVGNSEKRPD VPNQRTNPDF TLKQKDKNGN DSAIAKDKLL PGSLNLGRSE GSSSRRVVDT SSREPFSGGS DNANYETALK 401: GIDGLRINNN AGDETAATPQ SNGDDVEPQS KAL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)