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AT2G15660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : AGAMOUS-like 95
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AGAMOUS-like 95 (AGL95); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 48 (TAIR:AT2G40210.1); Has 310 Blast hits to 309 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 310; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5068eggNOG:KOG0014EMBL:AY649246EMBL:CP002685
EnsemblPlants:AT2G15660EnsemblPlants:AT2G15660.1entrez:816059GeneID:816059
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
Gramene:AT2G15660.1hmmpanther:PTHR11945hmmpanther:PTHR11945:SF174InterPro:IPR002100
KEGG:ath:AT2G15660PhylomeDB:Q6DR69Proteomes:UP000006548RefSeq:NP_179168.2
STRING:3702.AT2G15660.1SUPFAM:SSF55455TAIR:AT2G15660tair10-symbols:AGL95
UniGene:At.49339UniProt:Q6DR69
Coordinates (TAIR10) chr2:-:6824786..6825538
Molecular Weight (calculated) 29268.50 Da
IEP (calculated) 9.66
GRAVY (calculated) -0.58
Length 250 amino acids
Sequence (TAIR10)
(BLAST)
001: MGREQQVKSK KIEENKGMVN EKGRRTNYII LCAVKACIIM FSPHEVEPMV WPSFEKARDL LDGFFALPDI KKKKKQMSLE MYLKEKTKKV HEQFMKTQRK
101: HMDHVTDQLM VELHRGRRLD DLDLSEINAL ISFSRENIIL LRKELEFVQH SPLGDPRVPP FEAQFEELTT IANDVFVRGG QVDERAWKNY EATKRVSIGN
201: ALRGNQSHYL VDKWLFASPK PREPTNQSRL TYQTIFYTKE AVATDALIWI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)