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AT2G02590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577); Has 405 Blast hits to 405 proteins in 185 species: Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJIBeggNOG:ENOG41121MJEMBL:AC004136EMBL:AK226603
EMBL:AY086687EMBL:AY954777EMBL:CP002685EnsemblPlants:AT2G02590
EnsemblPlants:AT2G02590.1entrez:814789GeneID:814789GO:GO:0009507
GO:GO:0016021Gramene:AT2G02590.1hmmpanther:PTHR36007hmmpanther:PTHR36007:SF1
HOGENOM:HOG000006195InterPro:IPR009577KEGG:ath:AT2G02590OMA:VPVPFIV
Pfam:PF06695PhylomeDB:O64717PIR:T00604Proteomes:UP000006548
RefSeq:NP_178363.1TAIR:AT2G02590TMHMM:TMhelixUniGene:At.41478
UniProt:O64717
Coordinates (TAIR10) chr2:+:704977..706494
Molecular Weight (calculated) 35524.80 Da
IEP (calculated) 10.69
GRAVY (calculated) 0.48
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MAISTLLSIS SFTLSSSSST KTHLLTSIPA SRVYSYPISP KWKQIRFLQS QSSSLFYPLR RNFTRFCSSP DGFLRNTKDD EEGNEIIQLP SIGVNPVKFA
101: ICVVLWASFS LLWFARSGDA KAATDSIKSS SFGLRIASTL RRFGWPDEAV VFALATLPVI ELRGAIPVGY WMQLKPVVLT SFSVLGNMVP VPFIVLYLKT
201: FASFVAGKSQ TASKLLDILF KRAKEKAGPV EEFKWLGLML FVAVPFPGTG AWTGAIIASI LDMPFWSAVS SNFCGVVLAG LLVNLLVNLG LKQAIVAGIA
301: LFFVSTFMWS VLRNIRKSIK PSLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)