AT1G76470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.955 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, male gametophyte, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33590.1); Has 10841 Blast hits to 10825 proteins in 1773 species: Archae - 155; Bacteria - 4250; Metazoa - 416; Fungi - 802; Plants - 2399; Viruses - 56; Other Eukaryotes - 2763 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28689955..28691405 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36462.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.77 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||
| Length | 325 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVKQKVCVT GAGGFIASWL VKFLLSRGYT VHGTVRDPCD EKNDHLRKLD NASKNLKLFK ADLFDDEGLF SAIDGCSGVF HIASPVPFEG VPLTEEELIK 101: PALTGTKNVL EACTETKVQK VVVVSSIAAV VYNPKWPQDV AKDEDCWSDT QYLHSLEGYW RYYYLAKTLT EREALEWSKR NFADVVTLCP SVIIGPRLQS 201: TLNSSSLGLL KFIKGGIKSL LSDELYLVDV RDVADALLLV YENREATGRY ICNSHSLYTD SLMEKLKNMY PKRNFPESFT EVKEKEVRPL SAEKLKNLGW 301: KFRPLEETID DSVVSFEAAG DLPKA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)