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AT1G69230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.886
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SPIRAL1-like2
Curator
Summary (TAIR10)
SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.
Computational
Description (TAIR10)
SPIRAL1-like2 (SP1L2); BEST Arabidopsis thaliana protein match is: SPIRAL1-like1 (TAIR:AT1G26355.1); Has 157 Blast hits to 132 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2DIeggNOG:ENOG410XU77EMBL:AC008262EMBL:AC018364
EMBL:AY087016EMBL:BT024676EMBL:CP002684EnsemblPlants:AT1G69230
EnsemblPlants:AT1G69230.1EnsemblPlants:AT1G69230.2entrez:843254GeneID:843254
Genevisible:Q9LE54GO:GO:0005874Gramene:AT1G69230.1Gramene:AT1G69230.2
hmmpanther:PTHR33403hmmpanther:PTHR33403:SF1HOGENOM:HOG000240966InParanoid:Q9LE54
KEGG:ath:AT1G69230KO:K18635OMA:AGIQGRNPaxDb:Q9LE54
Pfam:Q9LE54PhylomeDB:Q9LE54PIR:C96716PRIDE:Q9LE54
PRO:PR:Q9LE54Proteomes:UP000006548RefSeq:NP_177083.1RefSeq:NP_974110.1
STRING:3702.AT1G69230.1TAIR:AT1G69230tair10-symbols:SP1L2UniGene:At.35439
UniProt:Q9LE54
Coordinates (TAIR10) chr1:-:26026543..26027085
Molecular Weight (calculated) 10882.40 Da
IEP (calculated) 7.69
GRAVY (calculated) -0.45
Length 110 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRGVSAGGG QSSLGYLFGS GEAPKLAAVN KTPAETESSA HAPPTQAAAA NAVDSIKQVP AGLNSNSANN YMRAEGQNTG NFITDRPSTK VHSAPGGGSS
101: LDYLFGGGSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)