AT1G66680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.530 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
unknown function | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
AR401; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1054 Blast hits to 1053 proteins in 391 species: Archae - 16; Bacteria - 384; Metazoa - 157; Fungi - 144; Plants - 125; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24866352..24868888 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39231.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.19 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||||||
| Length | 358 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGIRLLPEE PETTPQQQAR AAAAVTTTTT DSLASDDDRS IAADSWSIKS EYGSTLDDDQ RHADAAEALS SANFRVSSDY SSDKEEPDAD GGGQSMLGLQ 101: SYWDAAYSDE LTNFREHGHA GEVWFGDDVM EIVTSWTKDL CVEISQRNMS VSENDVTTEV NDQADKYLSS WNVLDLGTGN GLLLHQLAKE GFSDLTGTDY 201: SDGAVELAQH LSQRDGFPNI RFMVDDILDT KLEQQFKLVM DKGTLDAIGL HPDGPVKRVM YWDSVSKLVA PGGILVITSC NHTKDELVEE VENFNIRKSN 301: LCRGDGNDAN NVLSSGSEAA SRIDQPPFEY LSHVRTYPTF MFSGSVGSRV ATVAFLRK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)