suba logo
AT1G62700.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Arabidopsis NAC domain containing protein 26
Curator
Summary (TAIR10)
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational
Description (TAIR10)
Arabidopsis NAC domain containing protein 26 (ANAC026); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 007 (TAIR:AT1G12260.1); Has 3282 Blast hits to 3264 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 6; Plants - 3017; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEM9eggNOG:ENOG4111EYDEMBL:AC007190EMBL:CP002684
EnsemblPlants:AT1G62700EnsemblPlants:AT1G62700.1entrez:842568GeneID:842568
Genevisible:F4HYV5GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0006355GO:GO:0007275GO:GO:0043565GO:GO:0048759
GO:GO:0071555GO:GO:1901348Gramene:AT1G62700.1hmmpanther:PTHR31989
hmmpanther:PTHR31989:SF32InParanoid:F4HYV5IntAct:F4HYV5InterPro:IPR003441
KEGG:ath:AT1G62700OMA:NEEQSEWPaxDb:F4HYV5Pfam:F4HYV5
Pfam:PF02365Pfscan:PS51005PRIDE:F4HYV5PRO:PR:F4HYV5
PROSITE:PS51005ProteinModelPortal:F4HYV5Proteomes:UP000006548RefSeq:NP_176457.1
SMR:F4HYV5STRING:3702.AT1G62700.1SUPFAM:SSF101941TAIR:AT1G62700
tair10-symbols:ANAC026tair10-symbols:VND5UniGene:At.52328UniProt:F4HYV5
Coordinates (TAIR10) chr1:-:23216218..23217916
Molecular Weight (calculated) 45587.90 Da
IEP (calculated) 6.64
GRAVY (calculated) -0.91
Length 394 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDIIK DVDLYKIEPC DLQELCKIGN EEQSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YIRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETSEN GTPQEEGWVV CRVFKKKLAA TVRKMGDYHS SPSQHWYDDQ LSFMASEIIS SSPRQFLPNH
201: HYNRHHHQQT LPCGLNAFNN NNPNLQCKQE LELHYNQMVQ HQQQNHHLRE SMFLQLPQLE SPTSNCNSDN NNNTRNISNL QKSSNISHEE QLQQGNQSFS
301: SLYYDQGVEQ MTTDWRVLDK FVASQLSNDE EAAAVVSSSS HQNNVKIDTR NTGYHVIDEG INLPENDSER VVEMGEEYSN AHAASTSSSC QIDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)