AT1G48600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a phosphoethanolamine N-methyltransferase that catalyses the last two methylation steps of the three sequential methylations of phosphoethanolamine (PEA) that are required for the synthesis of phosphocholine (PCho) in plants. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphoethanolamine N-methyltransferase (PMEAMT); FUNCTIONS IN: phosphomethylethanolamine N-methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: phosphatidylcholine biosynthetic process; EXPRESSED IN: sperm cell, cotyledon, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 21397 Blast hits to 20726 proteins in 2642 species: Archae - 625; Bacteria - 15762; Metazoa - 271; Fungi - 989; Plants - 576; Viruses - 5; Other Eukaryotes - 3169 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17966448..17969077 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54021.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.79 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 475 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEHSSDLTVE AMMLDSKASD LDKEERPEVL SLIPPYEGKS VLELGAGIGR FTGELAQKAG EVIALDFIES AIQKNESVNG HYKNIKFMCA DVTSPDLKIK 101: DGSIDLIFSN WLLMYLSDKE VELMAERMIG WVKPGGYIFF RESCFHQSGD SKRKSNPTHY REPRFYTKVF QECQTRDASG NSFELSMVGC KCIGAYVKNK 201: KNQNQICWIW QKVSVENDKD FQRFLDNVQY KSSGILRYER VFGEGYVSTG GFETTKEFVA KMDLKPGQKV LDVGCGIGGG DFYMAENFDV HVVGIDLSVN 301: MISFALERAI GLKCSVEFEV ADCTTKTYPD NSFDVIYSRD TILHIQDKPA LFRTFFKWLK PGGKVLITDY CRSAETPSPE FAEYIKQRGY DLHDVQAYGQ 401: MLKDAGFDDV IAEDRTDQFV QVLRRELEKV EKEKEEFISD FSEEDYNDIV GGWSAKLERT ASGEQKWGLF IADKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)