suba logo
AT1G24148.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.975
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24147.1).
Protein Annotations
eggNOG:ENOG410JVUNeggNOG:ENOG41105JPEMBL:CP002684EnsemblPlants:AT1G24148
EnsemblPlants:AT1G24148.1entrez:6241475ExpressionAtlas:F4I954GeneID:6241475
Gramene:AT1G24148.1InParanoid:F4I954KEGG:ath:AT1G24148OMA:CENIPGH
PaxDb:F4I954Proteomes:UP000006548RefSeq:NP_001185077.1TAIR:AT1G24148
UniGene:At.47643UniGene:At.70007UniProt:F4I954
Coordinates (TAIR10) chr1:+:8544572..8545309
Molecular Weight (calculated) 12526.20 Da
IEP (calculated) 9.55
GRAVY (calculated) -0.39
Length 115 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSIHMNEAL GAQIEIRKLE ETMVMRRNKK GNGFVTSKID VPPSASQHCG GGKRFKNMAT TNRHDDQFSP LPGGVSSSLC IRCVTTQRCV GAVGAPRSTY
101: TCTIISKQCE NIPGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)