AT1G23935.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.641 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19515.2); Has 219 Blast hits to 219 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8461939..8465943 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83084.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.57 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||
| Length | 726 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNPEMNKLL NNLELKKLLG KSEVISICDI ELICKHQPEL ISKIIDVLVE YLNTEKPVEC DAVQEVFMAM VHVDKEASLT AMLNHLANFK VPDLKNKLPI 101: FIELALYKSN LTKRRISDVL EKSLQKESEA DLQRLAQYFE TKAGLDTFDV SDAHYVDRFI SCLLMAVPFF ARGAPSSKYF EFMNRHHILH HFDKLTEHRK 201: LDFLKSLAEM SSDTTAQAAG QMLPSIIELL KKCIPDTKME RESMNISYIE CLLYVLHHLA IKAPAAATDF CNEEFMLRLD CVRSITRARL KKLDTTLAKD 301: DKKVKSLCLL TGLIYFFYLL RDSTCPIAPI RSDALESVSK DCKLNLDDTG ICDLTDKQVQ SILDYSKYHQ VSRNKNGACV LNDNDDIAML GWQMKKSDLS 401: FLETAGEQGR SGEVRDQLFH LLCWAYAGSD LVSYQRLLQK WERKTLPLCP WYLCAFCEPE KLGEEEILDR NGEKKILVDR HGRVHHCYGG TIEKALCHVQ 501: SHGIPRDVVT NFLCTDYHPP SADEPDMERR KIKGFRKINT WKDVVEALQK QQIVGADLLN YSQLMMTSGK YIYKGPMSRM SVYVGYHAVV IEQIKKMNGE 601: WVAVCKMSNG TLVADYGYAY VSIEVQYMPV GASDLKRKRI RGSDHPMHLL TNFIIVDMVE ADENDRKDAE SEESEEKDSE NEEEEDYIPK AKRGLTKDPK 701: PKRSRTEDPT MVSIKVAISL HRLLHD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)