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AT1G17540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.925
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G72760.1); Has 111948 Blast hits to 110754 proteins in 4644 species: Archae - 110; Bacteria - 12962; Metazoa - 41520; Fungi - 9180; Plants - 32064; Viruses - 278; Other Eukaryotes - 15834 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G17540-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AK175712
EMBL:CP002684EnsemblPlants:AT1G17540EnsemblPlants:AT1G17540.1entrez:838328
Gene3D:2.60.120.200Gene3D:3.40.50.620GeneID:838328GO:GO:0004672
GO:GO:0005524GO:GO:0006950GO:GO:0016787Gramene:AT1G17540.1
hmmpanther:PTHR27003hmmpanther:PTHR27003:SF118HOGENOM:HOG000237993InterPro:IPR000719
InterPro:IPR001245InterPro:IPR006016InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR014729KEGG:ath:AT1G17540ncoils:Coil
OMA:EAPHDNQPfam:PF00582Pfam:PF07714Pfscan:PS50011
PhylomeDB:Q681A5PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548
Reactome:R-ATH-5213460RefSeq:NP_173197.2scanprosite:PS00108SMART:SM00220
SMR:Q681A5STRING:3702.AT1G17540.1SUPFAM:SSF52402SUPFAM:SSF56112
TAIR:AT1G17540UniGene:At.50932UniGene:At.68089UniProt:Q681A5
Coordinates (TAIR10) chr1:-:6029551..6032641
Molecular Weight (calculated) 80579.70 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.43
Length 728 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARRLKGKD SKAVTAIAID KDKNSQHALK WAVENIIIDS PNCILLHVQT KLRFGAGENT EAPHDNQEEA HQFFLPFRGF CARKGIIATE VLLHDIDISS
101: AIVDYITNNS ISNIVIGASA RNSFLKKFKS VDVPTTLLKT TPDTCAVFIV SKGKLLTSRS ASRPQTPQGP HTPQGPQTPQ APQHPPHPSK HPSMMSDPGP
201: TSSTSSESGR SSPALNGELS PPTPHYKPSL YRSSMSELSN EFPSDHSAES NASFYSILGR STYGGSSHSS MSEITDGEES LSGGNITEHQ NQNLEAEVRR
301: LRFELQQFNA SMSRESAPHL LGPRATAETE RLEEAKAARE MLRALSEMDK QKTQTAIQAT EVAQRLAEIE TQKRRLVEMQ ARFKEQNMAD SISYRRYSIR
401: DVEGATDGFS DALKIGEGGY GPVYKAVLEN TSVAIKLLKS DVSQGLKQFN QEIEVLSCMR HPNMVILLGA CPEYGCLVYE YMENGTLEDR LFCKDNTPPL
501: SWRARFRIAA EIATGLLFLH QAKPEPLVHR DLKPANILID RHFTSKISDV GLARLVPAAV ADSFSNYHMT AAAGTFCYID PEYQQTGMLG VKSDLYSFGV
601: VLLQIITAMP AMGLSHRVEK AIEKKKLREV LDPKISDWPE EETMVLAQLA LQCCELRKKD RPDLASVLLP ALSKLREFAT EDHEVHNSDR TFHVSRAHNL
701: VPLSPISSCQ TEDDAWENPI DRKIGTST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)