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AT1G11580.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:24012629 (2013): nucleus
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:18998720 (2009): extracellular region
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16729891 (2006): extracellular region
  • PMID:16356755 (2006): extracellular region
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:14595688 (2003): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methylesterase PCR A
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G11580-MONOMERBioGrid:22941EC:3.1.1.11EC:3.2.2.22
eggNOG:COG4677eggNOG:ENOG410II3NEMBL:AC011661EMBL:AF033205
EMBL:AY037175EMBL:AY048217EMBL:BT025336EMBL:CP002684
EnsemblPlants:AT1G11580EnsemblPlants:AT1G11580.1entrez:837701Gene3D:1.20.140.40
Gene3D:2.160.20.10GeneID:837701Genevisible:Q1JPL7GO:GO:0005576
GO:GO:0005618GO:GO:0005774GO:GO:0005829GO:GO:0009617
GO:GO:0017148GO:GO:0030598GO:GO:0030599GO:GO:0031640
GO:GO:0042545GO:GO:0043086GO:GO:0045330GO:GO:0045490
GO:GO:0046910GO:GO:0050832Gramene:AT1G11580.1gramene_pathway:3.1.1.11
gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF32HOGENOM:HOG000217409
InParanoid:Q1JPL7InterPro:IPR000070InterPro:IPR006501InterPro:IPR011050
InterPro:IPR012334InterPro:IPR018040InterPro:IPR033131iPTMnet:Q1JPL7
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11KEGG:ath:AT1G11580KO:K01051
OMA:NHIDPAGPaxDb:Q1JPL7Pfam:PF01095Pfam:PF04043
Pfam:Q1JPL7PIR:A86249PRIDE:Q1JPL7PRO:PR:Q1JPL7
PROSITE:PS00503PROSITE:PS00800ProteinModelPortal:Q1JPL7Proteomes:UP000006548
RefSeq:NP_172624.1scanprosite:PS00503scanprosite:PS00800SMART:SM00856
SMR:Q1JPL7STRING:3702.AT1G11580.1SUPFAM:SSF101148SUPFAM:SSF51126
SwissPalm:Q1JPL7TAIR:AT1G11580tair10-symbols:ATPMEPCRAtair10-symbols:PMEPCRA
TIGRfam:TIGR01614TIGRFAMs:TIGR01614TMHMM:TMhelixUniGene:At.24510
UniPathway:UPA00545UniProt:Q1JPL7
Coordinates (TAIR10) chr1:+:3888730..3890649
Molecular Weight (calculated) 61690.80 Da
IEP (calculated) 9.08
GRAVY (calculated) -0.20
Length 557 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNSNQPLLS KPKSLKHKNL CLVLSFVAIL GSVAFFTAQL ISVNTNNNDD SLLTTSQICH GAHDQDSCQA LLSEFTTLSL SKLNRLDLLH VFLKNSVWRL
101: ESTMTMVSEA RIRSNGVRDK AGFADCEEMM DVSKDRMMSS MEELRGGNYN LESYSNVHTW LSSVLTNYMT CLESISDVSV NSKQIVKPQL EDLVSRARVA
201: LAIFVSVLPA RDDLKMIISN RFPSWLTALD RKLLESSPKT LKVTANVVVA KDGTGKFKTV NEAVAAAPEN SNTRYVIYVK KGVYKETIDI GKKKKNLMLV
301: GDGKDATIIT GSLNVIDGST TFRSATVAAN GDGFMAQDIW FQNTAGPAKH QAVALRVSAD QTVINRCRID AYQDTLYTHT LRQFYRDSYI TGTVDFIFGN
401: SAVVFQNCDI VARNPGAGQK NMLTAQGRED QNQNTAISIQ KCKITASSDL APVKGSVKTF LGRPWKLYSR TVIMQSFIDN HIDPAGWFPW DGEFALSTLY
501: YGEYANTGPG ADTSKRVNWK GFKVIKDSKE AEQFTVAKLI QGGLWLKPTG VTFQEWL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)