suba logo
AT1G07810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:24030099 (2013): plasma membrane
  • PMID:22550958 (2012): plastid
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:15295017 (2004): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ER-type Ca2+-ATPase 1
Curator
Summary (TAIR10)
Encodes an ER-type Ca2+-pumping ATPase.
Computational
Description (TAIR10)
ER-type Ca2+-ATPase 1 (ECA1); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: manganese ion transport, response to cadmium ion, cellular manganese ion homeostasis, calcium ion transport, response to manganese ion; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52947 Blast hits to 34771 proteins in 3297 species: Archae - 1117; Bacteria - 37251; Metazoa - 4506; Fungi - 2912; Plants - 2416; Viruses - 3; Other Eukaryotes - 4742 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07810-MONOMERBioCyc:MetaCyc:MONOMER-14600BioGrid:22537BRENDA:3.6.3.8
EC:3.6.3.8eggNOG:COG0474eggNOG:KOG0202EMBL:AC007583
EMBL:AF116533EMBL:CP002684EMBL:U93845EMBL:U96455
EMBL:Y09817EnsemblPlants:AT1G07810EnsemblPlants:AT1G07810.1entrez:837296
Gene3D:1.20.1110.10Gene3D:2.70.150.10Gene3D:3.40.1110.10GeneID:837296
Genevisible:P92939GO:GO:0005388GO:GO:0005524GO:GO:0005774
GO:GO:0005783GO:GO:0005789GO:GO:0005886GO:GO:0005887
GO:GO:0006816GO:GO:0010042GO:GO:0030176GO:GO:0046686
GO:GO:0046872GO:GO:0070588Gramene:AT1G07810.1hmmpanther:PTHR24093
hmmpanther:PTHR24093:SF289HOGENOM:HOG000265621InParanoid:P92939InterPro:IPR001757
InterPro:IPR004014InterPro:IPR006068InterPro:IPR008250InterPro:IPR018303
InterPro:IPR023214InterPro:IPR023298InterPro:IPR023299iPTMnet:P92939
KEGG:ath:AT1G07810KO:K01537MINT:MINT-8063382OMA:ICANITK
PaxDb:P92939Pfam:P92939Pfam:PF00122Pfam:PF00689
Pfam:PF00690Pfam:PF12710PhylomeDB:P92939PIR:E86213
PRIDE:P92939PRO:PR:P92939PROSITE:PS00154ProteinModelPortal:P92939
Proteomes:UP000006548RefSeq:NP_172259.1scanprosite:PS00154SMART:SM00831
SMR:P92939STRING:3702.AT1G07810.1SUPFAM:0049471SUPFAM:0049473
SUPFAM:SSF56784SUPFAM:SSF81660TAIR:AT1G07810tair10-symbols:ACA3
tair10-symbols:ATECA1tair10-symbols:ECA1TCDB:3.A.3.2.13TIGRfam:TIGR01494
TIGRFAMs:TIGR01494TMHMM:TMhelixUniGene:At.25348UniGene:At.26214
UniProt:P92939
Coordinates (TAIR10) chr1:+:2416681..2420572
Molecular Weight (calculated) 116372.00 Da
IEP (calculated) 4.74
GRAVY (calculated) 0.06
Length 1061 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGKGSEDLVK KESLNSTPVN SDTFPAWAKD VAECEEHFVV SREKGLSSDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPM GRMDANLQMI AKIAAICNDA NVEQSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG DVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGNKL LLVKGAVENV LERSTHIQLL DGSKRELDQY SRDLILQSLR DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLI FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGIEFMDVQ DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DMVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHSSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTLSTKQKE E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)