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AT1G03055.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
EC:5.2.1.14eggNOG:ENOG410IJY6eggNOG:ENOG410YG2EEMBL:AC006550
EMBL:BT010155EMBL:CP002684EnsemblPlants:AT1G03055EnsemblPlants:AT1G03055.1
entrez:838334ExpressionAtlas:Q7XA78GeneID:838334Genevisible:Q7XA78
GO:GO:0009507GO:GO:0009536GO:GO:0010223GO:GO:0016853
GO:GO:0046872GO:GO:1901601hmmpanther:PTHR33591hmmpanther:PTHR33591:SF3
HOGENOM:HOG000242549InParanoid:Q7XA78InterPro:IPR025114KEGG:00906+5.2.1.14
KEGG:ath:AT1G03055KO:K17911OMA:PCEVMESPaxDb:Q7XA78
Pfam:PF13225Pfam:Q7XA78PhylomeDB:Q7XA78PRIDE:Q7XA78
PRO:PR:Q7XA78ProteinModelPortal:Q7XA78Proteomes:UP000006548RefSeq:NP_563673.1
STRING:3702.AT1G03055.1TAIR:AT1G03055UniGene:At.42563UniGene:At.51465
UniProt:Q7XA78
Coordinates (TAIR10) chr1:-:710102..711763
Molecular Weight (calculated) 29796.70 Da
IEP (calculated) 8.90
GRAVY (calculated) -0.36
Length 264 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)