AT1G02145.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.634 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : homolog of asparagine-linked glycosylation 12 | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT5G14850.1); Has 794 Blast hits to 784 proteins in 185 species: Archae - 0; Bacteria - 23; Metazoa - 309; Fungi - 268; Plants - 100; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:404627..408485 | ||||||||||||
| Molecular Weight (calculated) | 56806.90 Da | ||||||||||||
| IEP (calculated) | 9.41 | ||||||||||||
| GRAVY (calculated) | 0.31 | ||||||||||||
| Length | 493 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPTDSKMAKF LQSYGYDLIL GSVAAIYVVM APYTKVEESF NVQSMHDILY HRHHLDSYDH LEFPGVVPRT FIVSVFASPV VSIISCLGFP KVYSLVAARL 101: VLGCIILSTL RFFRIQIKKK FGNQVETFFV LFTSLQFHFL FYCTRPLPNI LALGLVNLAY GNWLKGNFYP ALSFLIFATV IFRCDTMLLL GPIGLELLLT 201: KSISFWKALK YCVGTALLAV GLTIFVDSIM WKKFVWPEFE VFWFNSILNR SSDWGTHSIH WYFTSALPRS LLVAYPLSLL GTLVDRRVPF FIVPVLSFVI 301: LYSKLPHKEL RFIISSVPMF NLSAAVAASR IYNNRKKTIW KLVNMVMLAF FAISAGCTVV TFMASYYNYP SGYALKRLHQ IGHPANVAGE EWVHIDTFGA 401: MNGISRFCED DFPWRYSKEE EIVVEELRNR NFTYLVNEHS SVDGYKCLFY EEGFERLELR RGFPPIVLVK KAKVYLHREM KKEDPFHKKW PGC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)