AT1G01020.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Arv1-like protein | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 311 Blast hits to 311 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 115; Plants - 42; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:6915..8666 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 28093.40 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.72 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.70 | ||||||||||||||||||||||||||||||||||||
Length | 245 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAASEHRCVG CGFRVKSLFI QYSPGNIRLM KCGNCKEVAD EYIECERMII FIDLILHRPK VYRHVLYNAI NPATVNIQHL LWKLVFAYLL LDCYRSLLLR 101: KSDEESSFSD SPVLLSIKVL IGVLSANAAF IISFAIATKG LLNEVSRRRE IMLGIFISSY FKIFLLAMLV WEFPMSVIFF VDILLLTSNS MALKVMTEST 201: MTRCIAVCLI AHLIRFLVGQ IFEPTIFLIQ IGSLLQYMSY FFRIV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)