suba logo
AT5G65800.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.987
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ACC synthase 5
Curator
Summary (TAIR10)
1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition.
Computational
Description (TAIR10)
ACC synthase 5 (ACS5); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 9 (TAIR:AT3G49700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:21951BRENDA:4.4.1.14ChEMBL:CHEMBL2242742EC:4.4.1.14eggNOG:COG0436eggNOG:KOG0256EMBL:AB010075
EMBL:AB020743EMBL:AF334720EMBL:AK229087EMBL:AL021684EMBL:CP002688EMBL:L29260EMBL:L29261
EnsemblPlants:AT5G65800EnsemblPlants:AT5G65800.1entrez:836709Gene3D:3.40.640.10Gene3D:3.90.1150.10GeneID:836709Genevisible:Q37001
GO:GO:0001944GO:GO:0009693GO:GO:0009735GO:GO:0009835GO:GO:0016847GO:GO:0030170GO:GO:0042218
GO:GO:0051301Gramene:AT5G65800.1gramene_pathway:4.4.1.14gramene_pathway:ETHYL-PWYgramene_pathway:PWY-4361-ARAhmmpanther:PTHR11751hmmpanther:PTHR11751:SF431
HOGENOM:HOG000011234InParanoid:Q37001IntAct:Q37001InterPro:IPR004838InterPro:IPR004839InterPro:IPR015421InterPro:IPR015422
InterPro:IPR015424iPTMnet:Q37001KEGG:ath:AT5G65800KO:K01762OMA:SHHQMLKPaxDb:Q37001Pfam:PF00155
Pfam:Q37001PhylomeDB:Q37001PIR:S71174PRIDE:Q37001PRO:PR:Q37001PROSITE:PS00105ProteinModelPortal:Q37001
Proteomes:UP000006548RefSeq:NP_201381.1SABIO-RK:Q37001scanprosite:PS00105SMR:Q37001STRING:3702.AT5G65800.1SUPFAM:SSF53383
TAIR:AT5G65800tair10-symbols:ACS5tair10-symbols:ATACS5tair10-symbols:CIN5tair10-symbols:ETO2UniGene:At.1918UniPathway:UPA00384
UniProt:Q37001
Coordinates (TAIR10) chr5:-:26331096..26332698
Molecular Weight (calculated) 53315.80 Da
IEP (calculated) 7.72
GRAVY (calculated) -0.34
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEIKNPNGM IQMGLAENQL CFDLIESWLT KNPDAASLKR NGQSIFRELA LFQDYHGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLEDTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQRRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWTDRVPDER
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)