AT5G65780.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:26311587..26315610 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 118193.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.83 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.98 | ||||||||||||||||||||||||||||||||
| Length | 1018 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MATSSRSERF PITPSTAATN RLTITPNSRV LKSPLTEEIM WKRLKDAGFD EQSIKNRDKA ALIAYIAKLE SEVYDYQHNM GLLLLEKNEL SSQYEEIKAS 0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKDLF IDFVLFFFSQ LEKTLHEMRA ECAETKVSAG STMSEAHVMI EDALKKLADA EAKMRAAEAL 0201: QAEANRYHRI AERKLKEVES REDDLTRRLA SFKSECETKE NEMVIERQTL NERRKSLQQE HERLLDAQVS LNQREDHIFA RSQELAELEK GLDTAKTTFE 0301: EERKAFEDKK SNLEIALALC AKREEAVSER ESSLLKKEQE LLVAEEKIAS KESELIQNVL ANQEVILRKR KSDVEAELEC KSKSVEVEIE SKRRAWELRE 0401: VDIKQREDLV GEKEHDLEVQ SRALAEKEKD ITEKSFNLDE KEKNLVATEE DINRKTTMLE DEKERLRKLD LELQQSLTSL EDKRKRVDSA TQKLEALKSE 0501: TSELSTLEMK LKEELDDLRA QKLEMLAEAD RLKVEKAKFE AEWEHIDVKR EELRKEAEYI TRQREAFSMY LKDERDNIKE ERDALRNQHK NDVESLNRER 0601: EEFMNKMVEE HSEWLSKIQR ERADFLLGIE MQKRELEYCI ENKREELENS SRDREKAFEQ EKKLEEERIQ SLKEMAEKEL EHVQVELKRL DAERLEIKLD 0701: RERREREWAE LKDSVEELKV QREKLETQRH MLRAERDEIR HEIEELKKLE NLKVALDDMS MAKMQLSNLE RSWEKVSALK QKVVSRDDEL DLQNGVSTVS 0801: NSEDGYNSSM ERQNGLTPSS ATPFSWIKRC TNLIFKTSPE KSTLMHHYEE EGGVPSEKLK LESSRREEKA YTEGLSIAVE RLEAGRKRRG NTSGDETSEP 0901: SNNKKRKHDV TQKYSDEADT QSVISSPQNV PEDKHELPSS QTQTPSGMVV ISETVKITRV TCETEVTNKV TTLDCSESPS EAGRKMGEET EDGDCNQTGI 1001: NASETVIHNE AATEDICT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)