AT5G56030.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.500 nucleus 0.500 ASURE: cytosol,nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : heat shock protein 81-2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:22686923..22689433 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83131.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.66 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 728 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DVRSLSLSTL LYTCVSRLID LADGSVDLGL ALDKIRFESL TDKSKLDGQP ELFIHIIPDK 101: TNNTLTIIDS GIGMTKADLV NNLGTIARSG TKEFMEALAA GADVSMIGQF GVGFYSAYLV ADKVVVTTKH NDDEQYVWES QAGGSFTVTR DTSGETLGRG 201: TKMVLYLKED QLEYLEERRL KDLVKKHSEF ISYPISLWIE KTIEKEISDD EEEEEKKDEE GKVEEVDEEK EKEEKKKKKI KEVSHEWDLV NKQKPIWMRK 301: PEEINKEEYA AFYKSLSNDW EEHLAVKHFS VEGQLEFKAI LFVPKRAPFD LFDTKKKPNN IKLYVRRVFI MDNCEDIIPE YLGFVKGIVD SEDLPLNISR 401: ETLQQNKILK VIRKNLVKKC LELFFEIAEN KEDYNKFYEA FSKNLKLGIH EDSQNRTKIA ELLRYHSTKS GDELTSLKDY VTRMKEGQND IFYITGESKK 501: AVENSPFLEK LKKKGIEVLY MVDAIDEYAI GQLKEFEGKK LVSATKEGLK LDETEDEKKK KEELKEKFEG LCKVIKDVLG DKVEKVIVSD RVVDSPCCLV 601: TGEYGWTANM ERIMKAQALR DSSMAGYMSS KKTMEINPEN SIMDELRKRA DADKNDKSVK DLVLLLFETA LLTSGFSLDE PNTFGSRIHR MLKLGLSIDD 701: DDAVEADAEM PPLEDDADAE GSKMEEVD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)