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AT5G02490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Heat shock protein 70 (Hsp 70) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, response to bacterium; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34231 Blast hits to 33880 proteins in 4856 species: Archae - 163; Bacteria - 16495; Metazoa - 3845; Fungi - 1761; Plants - 1263; Viruses - 309; Other Eukaryotes - 10395 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-696-MONOMERBioGrid:17132eggNOG:COG0443eggNOG:KOG0101EMBL:AK222068EMBL:AK227090EMBL:AL162971
EMBL:AY093152EMBL:BT008411EMBL:CP002688EMBL:M23106EMBL:X77199EMBL:Y08892EnsemblPlants:AT5G02490
EnsemblPlants:AT5G02490.1entrez:831856Gene3D:1.20.1270.10Gene3D:2.60.34.10GeneID:831856Genevisible:P22954GO:GO:0005524
GO:GO:0005618GO:GO:0005634GO:GO:0005794GO:GO:0005829GO:GO:0005886GO:GO:0006351GO:GO:0006355
GO:GO:0009408GO:GO:0009615GO:GO:0009617GO:GO:0046686Gramene:AT5G02490.1hmmpanther:PTHR19375hmmpanther:PTHR19375:SF232
HOGENOM:HOG000228135InParanoid:P22954IntAct:P22954InterPro:IPR013126InterPro:IPR018181InterPro:IPR029047InterPro:IPR029048
iPTMnet:P22954KEGG:ath:AT5G02490KO:K03283ncoils:CoilOMA:CNITAYDPaxDb:P22954Pfam:P22954
Pfam:PF00012PhylomeDB:P22954PIR:JA0170PIR:T48270PRIDE:P22954PRINTS:PR00301PRO:PR:P22954
PROSITE:PS00297PROSITE:PS00329PROSITE:PS01036ProteinModelPortal:P22954Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568
Reactome:R-ATH-3371571Reactome:R-ATH-72163RefSeq:NP_195869.1scanprosite:PS00297scanprosite:PS00329scanprosite:PS01036SMR:P22954
STRING:3702.AT5G02490.1SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067TAIR:AT5G02490UniGene:At.5363UniGene:At.74798
UniProt:P22954
Coordinates (TAIR10) chr5:-:550296..552565
Molecular Weight (calculated) 71390.80 Da
IEP (calculated) 4.75
GRAVY (calculated) -0.42
Length 653 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDR QLWPFTIISG
101: TAEKPMIVVE YKGEEKQFAA EEISSMVLIK MREIAEAFLG TTVKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKQDIT GQPRALRRLR TACERAKRTL SSTAQTTIEI DSLYGGADFY
301: SPITRARFEE MNMDLFRKCM EPVEKCLRDA KMDKSTVHEI VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVFE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGKKNKITIT NDKGRLSKED IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIR DEKIGEKLPA ADKKKVEDSI EEAIQWLDGN QLGEADEFED
601: KMKELESVCN PIIAKMYQGG AGGEAGGPGA SGMDEDEAPP ASGGAGPKIE EVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)