AT2G40430.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumour suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16879466..16882365 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 50035.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.57 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.87 | ||||||||||||||||||||||||
| Length | 441 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKRSKTSRK GKKAWRANIS SEDIEDFFEK TTRDALSGGN LSAAPSEDLF HVDKSHDLPV KRKIEKHRER VLRVDSILKK NPFVQLVPSS KPKLKKSKKT 101: IVIEDKAPKQ VQKSVGDDSV MADLWGDDSK GEHESNPRKI FKNPSIISAV EIEHPGCSYN PTTESHQDML AEAVAQEMQK VYKTELGPAP VPLTIEGDTL 201: SEDERYFLDV DNFSEGEDNE NVENEVSEAG IKLKENPFVQ LKPSSNTNLK KIEDKTPRQA QKSVGDDSVM VDLLGDDIKD LKYFLEVGNV GEGEDNKDVK 301: IEVSEAGNNV SRKTKRVTRV ELNKRCRQKA LRKKETKEKA KEKILNEIDS LPNILEEIAK EDEDKQNKHL RRVIAKQEVL KIRPPRLGKY KFEAPPVQVL 401: LTEEMTGSLR KLKACCTLAR DRFKSLEKRG ILVPSKQIRR F |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)