AT2G37290.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ypt/Rab-GAP domain of gyp1p superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G55020.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15656935..15661335 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 104601.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.40 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.74 | ||||||||||||||||||||||||||||||||
| Length | 916 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLSLVSKRS LEVDSRDAYG FALRPQHVQR YQEYLSIYTE EETERAEKWK NFLDRQEDRT AEPCSSDEEF QDTFQADGLE SGEDSDSESE EGSRNGKHED 101: CELSGTSEQQ LEQDRTETVG DVSKETEPAE EALVLDKSLR SDTESVKDEE EEKFESDKDK ESSVGSESES DEEQQSQAVK EPVDHVHIQQ EEKLVAEEDK 201: CESGHEEKAQ KETKAPRSVI EWAHIRPCLA SIEDMMCSRV KNVKSTKNGQ KNIVDDHASS IKESLSSIEE SGENDRDSET STSRSHSIKE ENEAQGSVSP 301: EPFFPWYEEL EVLVRLGVPK DLRGEVWQAF VGVKARRVER YYQDLLAQIT NSDENSSDVQ RKWKKQIEKD IPRTFPGHPA LNENGRDSLR RILLAYACHN 401: PSVGYCQAMN FFAGLLLLLM PEENAFWTLV GIIDDYFDGY YTEEMIESQV DQLVFEELMR ERFPKLGSLF SSDIQVSLHI FLPYTEQCDR FFYSNNPPDA 501: VNHLDYLGVQ VAWISGPWFL SIFVNIIPWE CVLRMWDVLL FEGNRVVLFR TAFAIMELYG PAIVATKDAG DAITSLQSLA SSTFDSSQLV LTACMGYIST 601: NEARLEELRK IHRPAVLEIV EERIQKGRVW KDKKGLASKL YSFKHEGSIL DHEQKSTQRN DGENQDDDDE SCSPFLNLDG ANVDSEVDSL PDLQEQVVWM 701: KVELCRLLEE KRSAVMRAEE LEIALMEMVK EDNRLELSAR IEQLERDVRE LKQVLSDKKE QETAMLQVLM KVEQDQKLTE DARINAEQDA AAQRYAVHVL 801: QEKNEKLVTQ LAQMEKKLVT AETTLEATLQ YESGQNKALS SSPRFTRTTT ESPKKKTGFL SFGLGWRDRN KAKQTEESNV DNTSNAASEA KSPSKESVNL 901: SKENKSEDLL DPETRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)