AT1G70830.4
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.924 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : MLP-like protein 28 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 737 Blast hits to 411 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 735; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:26710203..26711250 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32279.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.97 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||
| Length | 288 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPKQVQATF RDVICTKATG AQSALSSSGI TYMANGEAKV AKERIEAVEP DKNLITFRVI EGDLMKEYKS FLLTIQVTPK PGGPGSIVHW HLEYEKISEE 101: VAHPETLLQF CVEVSKEIDE HLLAEEEEVK TPETPSLVGK LETDVEIKAS AEKFHHMFAG KPHHVSKASP GNIQGCDLHE GDWGQVGSIV FWNYVHDREA 201: KVAKERIEAV EPNKNLITFR VIDGDLMKEY KSFLLTIQVT PKLGGPGSIV HWHLEYEKIS EEVAHPETLL QFCVEVSKEI DEHLLAEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)