AT5G50580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SUMO-activating enzyme 1B | ||||||||
| Curator Summary (TAIR10) |
Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. | ||||||||
| Computational Description (TAIR10) |
SUMO-activating enzyme 1B (SAE1B); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO activating enzyme 1B (TAIR:AT5G50680.2); Has 4947 Blast hits to 4294 proteins in 1121 species: Archae - 94; Bacteria - 1869; Metazoa - 1154; Fungi - 667; Plants - 410; Viruses - 0; Other Eukaryotes - 753 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:20585500..20587401 | ||||||||
| Molecular Weight (calculated) | 35400.50 Da | ||||||||
| IEP (calculated) | 4.75 | ||||||||
| GRAVY (calculated) | -0.12 | ||||||||
| Length | 318 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MDGDELTEQE TALYDRQIRV WGAGAQRRLS KSHVLVSGIK GTVAEFCKNI VLAGVGSVTL LDDRLVTTEV FNANFLILPD ENAYVGKTVA EICCDSLKDF 101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKLDET VECELTFPSF EEAVSVPWKP 201: MPRRTAKLYF AMRVIELFEE TEGRKPGECS LSDLPRVLKL KKELCEGNSV SENHIPDILL ERLVSNNTEF PPACAIIGGI LGQEVIKVIS GKGEPLKNFF 301: YFDAEDGKGV IEDLSHKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)