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AT3G17160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 54259 Blast hits to 25265 proteins in 1209 species: Archae - 350; Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants - 3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI BLink).
Protein Annotations
EMBL:AB026636EMBL:BT014866EMBL:CP002686EnsemblPlants:AT3G17160
EnsemblPlants:AT3G17160.1entrez:820973GeneID:820973Gramene:AT3G17160.1
KEGG:ath:AT3G17160OMA:THVEDDKPhylomeDB:Q9LSN1Proteomes:UP000006548
RefSeq:NP_188341.2TAIR:AT3G17160UniGene:At.48673UniGene:At.71146
UniProt:Q9LSN1
Coordinates (TAIR10) chr3:+:5852207..5852854
Molecular Weight (calculated) 18315.10 Da
IEP (calculated) 3.46
GRAVY (calculated) -1.67
Length 165 amino acids
Sequence (TAIR10)
(BLAST)
001: MTHVEDDKEF KEKPLVQVLS DDDSEVKEAK DGGGEEVTGG DGEGEANVEE EDDEAENEDD DDDDDDDDDD DEDEDDEEGE EDLGTEYLVR PVGEVEDEDD
101: ASDFDPEENG LDEEEGDEEI EEDDVDEDIS LSAGKSEPLS KRKRVAKDHS EQGDVTGDNI RPSKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)