AT5G66180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8827 Blast hits to 7075 proteins in 2181 species: Archae - 455; Bacteria - 6424; Metazoa - 542; Fungi - 251; Plants - 202; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:26448952..26450919 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44211.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.92 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||
| Length | 395 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEETSKLQLP ESFLSFLEAN GLDPSIYTHG DSIPRYVRLK PGFEDAFEEI ESEINCKLEK VNWLPGFYSI PPDVHIARTK AYQQGMMYGI DAASGAAVSA 101: LGISPGDHVL DLCAAPGAKL CMMLDLLGQK GTATGVDVAR HRLAACRTML LKYGLAERSR LFLADGTTFS VPPTRNLPCE SCVDDHEDTF KQWTSRRPYK 201: ERKQEAKARK NSVLPQNGQA EIIFYGQGSG VIGLKKNELY RSLDQNDYAS YGYDKVLVDA ECTHDGSIKH IQKFEQWGWK TLERRVLDAE RTDTNLKALQ 301: LNLLRNGFRL LKEAGTLVYS TCSLTHAQNE DVVDQFLSEN FSAELQEIEM AKDWPCRSGR TPKTLRFDPS TSATSGLFVA KIRKLPPNEA KKNVL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)