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AT5G65495.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.936
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:21917eggNOG:ENOG410J4A8eggNOG:ENOG411168ZEMBL:AB026638
EMBL:AK118625EMBL:BT004684EMBL:CP002688EnsemblPlants:AT5G65495
EnsemblPlants:AT5G65495.1entrez:836675GeneID:836675Gramene:AT5G65495.1
HOGENOM:HOG000154335InParanoid:Q8GWU7IntAct:Q8GWU7KEGG:ath:AT5G65495
ncoils:CoilOMA:RRSHDGEPaxDb:Q8GWU7Pfam:Q8GWU7
PRO:PR:Q8GWU7Proteomes:UP000006548RefSeq:NP_850928.1STRING:3702.AT5G65495.1
TAIR:AT5G65495UniGene:At.43119UniProt:Q8GWU7
Coordinates (TAIR10) chr5:+:26180507..26180791
Molecular Weight (calculated) 11222.30 Da
IEP (calculated) 10.55
GRAVY (calculated) -0.97
Length 94 amino acids
Sequence (TAIR10)
(BLAST)
1: MCYGHNQSLS SRSSLRRRSH DGEDDSVVDD LRDRLAETEA RLRRARAREA ELSRRLEHMK RFVSVMEIIE TFLERRFQEQ KDRIARLFSP VSTK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)