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AT5G51020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22014227 (2012): plastid plastid envelope plastid outer membrane
  • PMID:21515817 (2011): mitochondrion
  • PMID:15086805 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : crumpled leaf
Curator
Summary (TAIR10)
Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division.
Computational
Description (TAIR10)
CRUMPLED LEAF (CRL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1001 (InterPro:IPR010404); Has 109 Blast hits to 109 proteins in 37 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
EC:4.-.-.-eggNOG:ENOG410IEDTeggNOG:ENOG410Z81YEMBL:AB017063
EMBL:AB120415EMBL:AF370196EMBL:AY086572EMBL:AY113932
EMBL:CP002688EnsemblPlants:AT5G51020EnsemblPlants:AT5G51020.1entrez:835175
GeneID:835175Genevisible:Q9FI46GO:GO:0000302GO:GO:0006952
GO:GO:0007049GO:GO:0007275GO:GO:0009707GO:GO:0010020
GO:GO:0016021GO:GO:0016829GO:GO:0017009GO:GO:0043572
GO:GO:0046741GO:GO:0051301GO:GO:0051302GO:GO:0098586
Gramene:AT5G51020.1hmmpanther:PTHR35137hmmpanther:PTHR35137:SF1HOGENOM:HOG000272706
InParanoid:Q9FI46InterPro:IPR010404iPTMnet:Q9FI46KEGG:ath:AT5G51020
OMA:NNEIHTWPaxDb:Q9FI46Pfam:PF06206Pfam:Q9FI46
PhylomeDB:Q9FI46PRIDE:Q9FI46PRO:PR:Q9FI46ProteinModelPortal:Q9FI46
Proteomes:UP000006548RefSeq:NP_199915.1STRING:3702.AT5G51020.1TAIR:AT5G51020
tair10-symbols:CRLUniGene:At.20990UniGene:At.49159UniProt:Q9FI46
Coordinates (TAIR10) chr5:-:20745560..20747165
Molecular Weight (calculated) 30331.70 Da
IEP (calculated) 6.89
GRAVY (calculated) -0.63
Length 269 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTESGSDPE SSSNGWSRAR GLVVKTLVLI GGALLIKRLT KSTTRRDHAR VVSRSLTGEK FTREQASRDP DNYFNIRMLS CPAAEMVDGS EVLYLEQAFW
101: RTPQKPFRQR LYMVKPCPKE LKCDVEVSSY AIRDAEEYKN FCDRPKDQRP LPEEVIGDIG EHLTTIHLNC CDRGKRCLYE GSTSPGGFPN SWNGASYCTS
201: DLAVLKNNEI HLWDRGFDEN RNQVWGPKEG PYEFKPATSS SINENLSALN ILYQSSIDKP IQGSLILQD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)