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AT5G49650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : xylulose kinase-2
Curator
Summary (TAIR10)
Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.
Computational
Description (TAIR10)
xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G49650-MONOMERDNASU:835027eggNOG:COG1070eggNOG:KOG2531
EMBL:AY050843EMBL:AY142596EMBL:CP002688EnsemblPlants:AT5G49650
EnsemblPlants:AT5G49650.1entrez:835027ExpressionAtlas:Q949W8GeneID:835027
GO:GO:0004856GO:GO:0005829GO:GO:0005997GO:GO:0046835
Gramene:AT5G49650.1gramene_pathway:2.7.1.17gramene_pathway:XYLCAT-PWYhmmpanther:PTHR10196
hmmpanther:PTHR10196:SF57InterPro:IPR018484InterPro:IPR018485KEGG:ath:AT5G49650
KO:K00854OMA:NDMEIIPPfam:PF00370Pfam:PF02782
PhylomeDB:Q949W8Proteomes:UP000006548Reactome:R-ATH-5661270RefSeq:NP_199776.1
SMR:Q949W8STRING:3702.AT5G49650.1SUPFAM:SSF53067TAIR:AT5G49650
tair10-symbols:XK-2tair10-symbols:XK2UniGene:At.23406UniProt:Q949W8
Coordinates (TAIR10) chr5:+:20152898..20155574
Molecular Weight (calculated) 61298.10 Da
IEP (calculated) 5.19
GRAVY (calculated) -0.21
Length 558 amino acids
Sequence (TAIR10)
(BLAST)
001: MADLSLPPDS LFLGFDSSTQ SMKATVLDSN LNIIKTELVH FDSDLPQYKT KDGVYRDTTV NGRIVSPTLM WVEAFDLILQ KLSNANFDFA KVIAVSGSGQ
101: QHGSVYWSKG SSEVLRSLDS KRSLKEQLEN AFSVKESPIW MDSSTTLQCK EIENAVGGAM ELSKITGSRA YERFTGPQIR KLFMTQGEVY KSTERISLVS
201: SFMASLLVGD YACIDETDAA GMNLMDIEKR CWSKAALEAT ATGLEEKLGK LAPAYATAGS ISQYFVQRFG FEKNCVVVQW SGDNPNSLAG LTLSTPGDLA
301: ISLGTSDTVF GITKELQPSL EGHVLPNPVD PESYMVMLVY KNASLTREEI RDRCAEGSWD VFNKYLQQTQ PLNNGKLGFY YTENEILPPL PVGSHRYILE
401: NFSGESLEGV KEQEVGEFDP PSEVRALIEG QFLSKRAHTE RFGMPSPPLR IIATGGASAN ENILSLISAI FGCDVYTVQR PDSASLGAAL RAAHGWLCNK
501: KGSFVPISNL YEGKLETTSL NCKLKVKAGD ANIASTYGLL MKKRMEIENK LVEKLGHF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)