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AT5G45970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : RAC-like 2
Curator
Summary (TAIR10)
Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family.
Computational
Description (TAIR10)
RAC-like 2 (RAC2); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 3 (TAIR:AT4G35020.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:19886eggNOG:COG1100eggNOG:KOG0393EMBL:AB006698
EMBL:AF115469EMBL:CP002688EMBL:U43026EnsemblPlants:AT5G45970
EnsemblPlants:AT5G45970.1entrez:834637EvolutionaryTrace:Q38903Gene3D:3.40.50.300
GeneID:834637Genevisible:Q38903GO:GO:0005525GO:GO:0005737
GO:GO:0005886GO:GO:0007264Gramene:AT5G45970.1hmmpanther:PTHR24072
hmmpanther:PTHR24072:SF167HOGENOM:HOG000233974InParanoid:Q38903IntAct:Q38903
InterPro:IPR001806InterPro:IPR005225InterPro:IPR027417KEGG:ath:AT5G45970
KO:K04392OMA:PIRNTRKPaxDb:Q38903PDB:2WBL
PDBsum:2WBLPfam:PF00071Pfam:Q38903Pfscan:PS51420
PhylomeDB:Q38903PIR:T48862PRIDE:Q38903PRO:PR:Q38903
PROSITE:PS51420ProteinModelPortal:Q38903Proteomes:UP000006548Reactome:R-ATH-194840
Reactome:R-ATH-198203Reactome:R-ATH-392451Reactome:R-ATH-5666185RefSeq:NP_199409.1
SMR:Q38903STRING:3702.AT5G45970.1SUPFAM:SSF52540TAIR:AT5G45970
tair10-symbols:ARAC2tair10-symbols:ATRAC2tair10-symbols:ATROP7tair10-symbols:RAC2
tair10-symbols:ROP7TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.7254
UniProt:Q38903
Coordinates (TAIR10) chr5:+:18643761..18645758
Molecular Weight (calculated) 22394.30 Da
IEP (calculated) 10.14
GRAVY (calculated) -0.15
Length 201 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENIHKKW
101: LPELKHYAPG IPIVLVGTKL DLRDDKQFLK DHPGAASITT AQGEELRKMI GAVRYLECSS KTQQNVKAVF DTAIRVALRP PKAKKKIKPL KTKRSRICFF
201: L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)