AT5G45810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.982 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CBL-interacting protein kinase 19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.5), which has also been reported as a member of the CBL-interacting protein kinases (CIPK19). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CBL-interacting protein kinase 19 (CIPK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 12 (TAIR:AT4G18700.1); Has 131743 Blast hits to 129755 proteins in 4578 species: Archae - 210; Bacteria - 15711; Metazoa - 47953; Fungi - 13173; Plants - 32300; Viruses - 528; Other Eukaryotes - 21868 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:18584942..18586393 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54619.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 483 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADLLRKVKS IKKKQDQSNH QALILGKYEM GRLLGHGTFA KVYLARNAQS GESVAIKVID KEKVLKSGLI AHIKREISIL RRVRHPNIVQ LFEVMATKSK 101: IYFVMEYVKG GELFNKVAKG RLKEEMARKY FQQLISAVSF CHFRGVYHRD LKPENLLLDE NGNLKVSDFG LSAVSDQIRQ DGLFHTFCGT PAYVAPEVLA 201: RKGYDGAKVD IWSCGVILFV LMAGFLPFHD RNVMAMYKKI YRGDFRCPRW FPVEINRLLI RMLETKPERR FTMPDIMETS WFKKGFKHIK FYVEDDHQLC 301: NVADDDEIES IESVSGRSST VSEPEDFESF DGRRRGGSMP RPASLNAFDL ISFSPGFDLS GLFEDDGEGS RFVSGAPVGQ IISKLEEIAR IVSFTVRKKD 401: CKVSLEGSRE GSMKGPLSIA AEIFELTPAL VVVEVKKKGG DKMEYDEFCN KELKPKLQNL SSENGQRVSG SRSLPSFLLS DTD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)